Update
Is my understanding correct, and can help improve my
explanation?
Sian, think question interpretation might also be a problem
Is it because :in this qn, the amino acids are part of a
polypeptide chain, e.g. val-tyr-asp- etc etc
Then, both val and tyr's nh2 and cooh is used up in amide bond
linkage
Only aspartic acid has the extra cooh group, hence can interact
with the qn?
But then wouldnt it be Hbond interactions?
I thought of another :
Is it because ph 7, so means its in water? ( thats why the acid
and basic group will deprotonate and protonate??)
Thats why will have ionic interactions instead of h bonding?
But if its in water, then hydrolysis would occur, then
wouldnt the nh2 and cooh group on val and tyr able to interact?
?
Help!
1st of all, hydrolysis only occurs partially, it's an acid-base
*equilibrium* remember?
2ndly, technically (Singapore JCs don't teach this well so it's not
surprising JC students don't really understand this), while COOH
and NH2 groups are only capable of (both donating and accepting) H
bonds, COO- and NH3+ groups are actually capable of participating
in both H bonds (COO- can only accept H bonds, while NH3+ can only
donate H bonds) as well as ionic bonds, depending on who the other
party is.
And yes, Cambridge expects you to automatically first deprotonate
COOH groups at pH7, and protonate NH2 groups at pH7.